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Image Search Results
Journal: Cells
Article Title: Rapid Identification of Infectious Pathogens at the Single-Cell Level via Combining Hyperspectral Microscopic Images and Deep Learning
doi: 10.3390/cells12030379
Figure Lengend Snippet: Hyperspectral microscopic imaging. ( A ) The HMI system, consisting of a microscope and a hyperspectral sensor. ( B ) An original MD, which has a dimension of 1000 × 1000 × 277. ( C ) MD of a single bacterium cropped from the original MD, which was used as an experimental sample. ( D ) Spectral profiles of bacteria and background. ( E ) An intensity image of individual bands in the original MD, reflecting the bacteria morphology.
Article Snippet: One was a
Techniques: Imaging, Microscopy, Bacteria
Journal: Cells
Article Title: Rapid Identification of Infectious Pathogens at the Single-Cell Level via Combining Hyperspectral Microscopic Images and Deep Learning
doi: 10.3390/cells12030379
Figure Lengend Snippet: The workflow for detecting bacterial species with MDs and deep learning. ( A ) The illustration of the three-dimensional model for pathogens. ( B ) The structure of the hyperspectral microscope. ( C ) The MDs of individual bacterium fed into the BI-Net were cropped from the original MD. ( D ) The structure of the BI-Net proposed for identifying common pathogens, which can be divided into two parts: backbone and classifier. Based on the 3D-CNN, the backbone extracted the spatial–spectral features from the bacteria and fused them into a classifier. The classifier was used for bacterial identification with a fully connected layer and SoftMax. ( E ) The identification of uncommon species was based on BI-Net after transfer learning with the same structure and finetuned weights of the backbone. The classifier was redesigned and retrained.
Article Snippet: One was a
Techniques: Microscopy, Bacteria